check_known_collections

Simple function that checks for known_collections columns in a reference and mixture and
makes sure that they are compliant.
If there is a non-NA entry in the Mixture frame's known_collection column this
function returns TRUE. Otherwise it returns FALSE.

internal

Implements Bayesian inference for the conditional genetic
stock identification model. It allows inference of mixed fisheries and also
simulation of mixtures to predict accuracy. A full description of the underlying
methods is available in a recently published article in the
Canadian Journal of Fisheries and Aquatic Sciences: <doi:10.1139/cjfas-2018-0016>.

Eric C. Anderson

rubias

Bayesian Inference from the Conditional Genetic Stock
Identification Model

check_known_collections function

<dl><dt>R</dt>
<dd>reference data frame</dd>
<dt>M</dt>
<dd>mixture data frame</dd></dl>

Arguments

check a baseline and mixture file together to ensure the known_collections are valid if they exist — check_known_collections

<dl>

<dt>R</dt>
<dd>reference data frame</dd>


<dt>M</dt>
<dd>mixture data frame</dd>

</dl>

check_known_collections: check a baseline and mixture file together to ensure the known_collections are valid if they exist

Description

Usage

Arguments