rvalues v0.6.3

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by Nicholas Henderson View Source

R-Values for Ranking in High-Dimensional Settings

A collection of functions for computing "r-values" from various kinds of user input such as MCMC output or a list of effect size estimates and associated standard errors. Given a large collection of measurement units, the r-value, r, of a particular unit is a reported percentile that may be interpreted as the smallest percentile at which the unit should be placed in the top r-fraction of units.

Readme

rvalues

an R package to calculate r-values for ranking and selection in large-scale inference

Installation

library(devtools)

install_github("wiscstatman/rvalues")

Functions in rvalues

Name	Description
bcwest	Breast Cancer Gene Expression Data
rvalues	R-values
FDRCurve	FDR Curve
PostSummaries	R-values from posterior summary quantities
OverlapCurve	Overlap Curve
PostPercentile	Posterior expected percentiles
TopList	List of Top Units
hiv	HIV Data Set
MCMCtest	MCMC sample output
rvalueBoot	Bootstrapped r-values
mroot	Multi-dimensional Root (Zero) Finding
Valpha	R-values from a matrix of posterior tail probabilities.
batavgs	Batting Averages Data
npmixapply	Apply Functions over estimated unit-specific posterior distributions
fluEnrich	Flu Enrichment Data
MakeGrid	Grid Construction
npmle	Maximum Likelihood Estimate of a Mixing Distribution.
NBA1314	National Basketball Association, free throw data, 2013-2014 season
tdist	t-distribution family object
rvaluesMCMC	R-values from MCMC output.
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Details

Type	Package
Date	2018-5-21
License	GPL-2
LazyData	yes
NeedsCompilation	yes
Packaged	2018-05-21 16:01:36 UTC; nhenders
Repository	CRAN
Date/Publication	2018-05-23 09:30:14

imports	graphics , stats , utils
Contributors	Michael Newton