print.rwty.chain

This function is automatically called when printing a rwty.chain object

plot

phylogenetics

MCMC

convergence

rwty

awty

Implements various tests, visualizations, and metrics
for diagnosing convergence of MCMC chains in phylogenetics. It implements
and automates many of the functions of the AWTY package in the R
environment, as well as a host of other functions. Warren, Geneva, and Lanfear (2017), <doi:10.1093/molbev/msw279>.

Dan Warren

R We There Yet? Visualizing MCMC Convergence in Phylogenetics

Anthony Geneva

Rob Lanfear

Luke Harmon

April Wright

Diego Mallo

Klaus Schliep

Kelly Luke

Kendall Michelle

Smith Martin

print.rwty.chain function

<dl><dt>x</dt>
<dd>A rwty.chain object</dd>
<dt>...</dt>
<dd>Other arguments to be passed on to next function</dd></dl>

Arguments

Function for printing rwty.chain objects — print.rwty.chain

<dl>

<dt>x</dt>
<dd>A rwty.chain object</dd>


<dt>...</dt>
<dd>Other arguments to be passed on to next function</dd>

</dl>

Function for printing rwty.chain objects

print.rwty.chain: Function for printing rwty.chain objects

Description

Usage

Value

Arguments

Examples