safetyGraphics (version 0.7.3)

generateSettings: Generate a settings object based on a data standard

Description

This function returns a settings object for the eDish chart based on the specified data standard.

Usage

generateSettings(standard = "None", chart = "eDish", partial = FALSE,
  partial_cols = NULL)

Arguments

standard

The data standard for which to create settings. Valid options are "SDTM", "AdAM" or "None". Default: "SDTM"

chart

The chart for which standards should be generated ("eDish" only for now) . Default: "eDish".

partial

Boolean for whether or not the standard is a partial standard. Default: "NULL".

partial_cols

Optional character vector of the matched cols if partial is TRUE. It will not be used if partial is FALSE Default: "NULL".

Value

A list containing the appropriate settings for the selected chart

Details

The function is designed to work with the SDTM and AdAM CDISC(<https://www.cdisc.org/>) standards for clinical trial data. Currently, eDish is the only chart supported.

Examples

# NOT RUN {
generateSettings(standard="SDTM") 
generateSettings(standard="SdTm") #also ok
generateSettings(standard="SDTM", partial=TRUE, partial_cols = c("USUBJID","TEST","STRESN"))
generateSettings(standard="AdAM")

generateSettings(standard="a different standard") 
#returns shell settings list with no data mapping

# }
# NOT RUN {
generateSettings(standard="adam",chart="AEExplorer") #Throws error. Only eDish supported so far. 
# }
# NOT RUN {
# }