sagenhaft (version 1.42.0)
Collection of functions for reading and comparing SAGE
libraries
Description
This package implements several functions useful for
analysis of gene expression data by sequencing tags as done in
SAGE (Serial Analysis of Gene Expressen) data,
i.e. extraction of a SAGE library from sequence files,
sequence error correction, library comparison. Sequencing error
correction is implementing using an Expectation Maximization Algorithm
based on a Mixture Model of tag counts.