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salmonMSE (version 0.1.0)

PNI50: Example performance metrics

Description

Functions that evaluate return probabilities of outcomes from the simulations.

Usage

PNI50(SMSE, Ref = 0.5, Yrs = NULL)
PNI80(SMSE, Ref = 0.8, Yrs = NULL)
WILD50(SMSE, Ref = 0.5, Yrs = NULL)
SMSY85(SMSE, Ref = 0.85, Yrs = NULL)
Sgen100(SMSE, Ref = 1, Yrs = NULL)

Value

A vector of probabilities corresponding to population

Arguments

SMSE

SMSE object returned by salmonMSE()

Ref

Threshold for the performance metric, used to calculate the probability that the metric exceeds this value

Yrs

Numeric vector of length 2 to indicate the year range over which to summarize performance. If NULL, the performance is summarized over all projection years.

Details

  • PNI50 calculates the probability that PNI exceeds 0.50 (threshold for an integrated-transition population, Withler et al. 2018)

  • PNI80 calculates the probability that PNI exceeds 0.80 (threshold for an integrated-wild population, Withler et al. 2018)

  • WILD50 calculates the probability that at least 50 percent of natural spawners are wild

  • SMSY85 calculates the probability that NOS/SMSY exceeds 0.85

  • Sgen100 calculates the probability that NOS/Sgen exceeds 1

References

Withler et al. 2018. Genetically Based Targets for Enhanced Contributions to Canadian Pacific Chinook Salmon Populations. DFO Can. Sci. Advis. Sec. Res. Doc. 2018/019. xii + 88 p.