sbpiper (version 1.9.0)

gen_stats_table: Generate a table of statistics for each model readout.

Description

Generate a table of statistics for each model readout.

Usage

gen_stats_table(inputfile, outputfile, column_to_read = "X1")

Arguments

inputfile

the file to store the simulated repeats

outputfile

the file to store the statistics

column_to_read

the name of the column to process

Examples

# NOT RUN {
data(insulin_receptor_1)
data(insulin_receptor_2)
data(insulin_receptor_3)
dir.create(file.path("sim_datasets"))
dir.create(file.path("sim_datasets_sum"))
write.table(insulin_receptor_1, 
            file=file.path("sim_datasets","insulin_receptor_1.csv"), 
            row.names=FALSE)
write.table(insulin_receptor_2, 
            file=file.path("sim_datasets","insulin_receptor_2.csv"), 
            row.names=FALSE)
write.table(insulin_receptor_3, 
            file=file.path("sim_datasets","insulin_receptor_3.csv"), 
            row.names=FALSE)
summarise_data(inputdir="sim_datasets", 
               model="insulin_receptor", 
               outputfile=file.path("sim_datasets_sum", 
                                    "insulin_receptor_IR_beta_pY1146.csv"), 
               column_to_read="IR_beta_pY1146")
gen_stats_table(inputfile=file.path("sim_datasets_sum", 
                                    "insulin_receptor_IR_beta_pY1146.csv"), 
                outputfile="insulin_receptor_IR_beta_pY1146_stats.csv", 
                column_to_read="IR_beta_pY1146")
# }