sbpiper (version 1.9.0)

sbpiper_ps2: Main R function for SBpipe pipeline: parameter_scan2().

Description

Main R function for SBpipe pipeline: parameter_scan2().

Usage

sbpiper_ps2(model, scanned_par1, scanned_par2, inputdir, outputdir, run)

Arguments

model

the model name

scanned_par1

the 1st scanned parameter

scanned_par2

the 2nd scanned parameter

inputdir

the input directory

outputdir

the output directory

run

the simulation run

Examples

# NOT RUN {
data(insulin_receptor_ps2_tp2)
dir.create(file.path("ps2_datasets"))
write.table(insulin_receptor_ps2_tp2, 
            file=file.path("ps2_datasets", 
                           "insulin_receptor_InsulinPercent__IRbetaPercent__rep_1__tp_2.csv"), 
            row.names=FALSE)
sbpiper_ps2(model="insulin_receptor_InsulinPercent__IRbetaPercent", 
           scanned_par1="InsulinPercent", 
           scanned_par2="IRbetaPercent", 
           inputdir="ps2_datasets", 
           outputdir="ps2_plots", 
           run=1)
# }