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scBio (version 0.1.6)

Single Cell Genomics for Enhancing Cell Composition Inference from Bulk Genomics Data

Description

Cellular population mapping (CPM) a deconvolution algorithm in which single-cell genomics is required in only one or a few samples, where in other samples of the same tissue, only bulk genomics is measured and the underlying fine resolution cellular heterogeneity is inferred.

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Install

install.packages('scBio')

Monthly Downloads

179

Version

0.1.6

License

GPL-2

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Repository

https://github.com/amitfrish/scBio

Maintainer

Amit Frishberg

Last Published

May 20th, 2020

Functions in scBio (0.1.6)

The Cellular Population Mapping (CPM) algorithm.

Gene expression profiles of flu and pbs sample.

Single-cell classification into cell types.

Single-cell cell space.

Gene expression profiles of lung cells after influenza infection.