lncRNA_gene_list

A list of gene symbol ids for lncRNA genes (Ensembl version 113; 04/08/2025)

datasets

Collection of functions created and/or curated to aid in the visualization and analysis of single-cell data using 'R'. 'scCustomize' aims to provide 1) Customized visualizations for aid in ease of use and to create more aesthetic and functional visuals. 2) Improve speed/reproducibility of common tasks/pieces of code in scRNA-seq analysis with a single or group of functions. For citation please use: Marsh SE (2021) "Custom Visualizations & Functions for Streamlined Analyses of Single Cell Sequencing" <doi:10.5281/zenodo.5706430> RRID:SCR_024675.

Samuel Marsh

scCustomize

Custom Visualizations & Functions for Streamlined Analyses of
Single Cell Sequencing

Ming Tang

Velina Kozareva

Lucas Graybuck

Zoe Clarke

lncRNA_gene_list function

A list of six vectors<dl>
<dt>Mus_musculus_lncRNA</dt>
<dd>Ensembl IDs for mouse lncRNA genes</dd><dt>Homo_sapiens_lncRNA</dt>
<dd>Ensembl IDs for human lncRNA genes</dd><dt>Danio_rerio_lncRNA</dt>
<dd>Ensembl IDs for zebrafish lncRNA genes</dd><dt>Rattus_norvegicus_lncRNA</dt>
<dd>Ensembl IDs for rat lncRNA genes</dd><dt>Macaca_mulatta_lncRNA</dt>
<dd>Ensembl IDs for macaque lncRNA genes</dd><dt>Gallus_gallus_lncRNA</dt>
<dd>Ensembl IDs for chicken lncRNA genes</dd>
</dl>

Format

lncRNA gene list — lncRNA_gene_list

A list of six vectors<dl>
<dt>Mus_musculus_lncRNA</dt>
<dd>Ensembl IDs for mouse lncRNA genes</dd>

<dt>Homo_sapiens_lncRNA</dt>
<dd>Ensembl IDs for human lncRNA genes</dd>

<dt>Danio_rerio_lncRNA</dt>
<dd>Ensembl IDs for zebrafish lncRNA genes</dd>

<dt>Rattus_norvegicus_lncRNA</dt>
<dd>Ensembl IDs for rat lncRNA genes</dd>

<dt>Macaca_mulatta_lncRNA</dt>
<dd>Ensembl IDs for macaque lncRNA genes</dd>

<dt>Gallus_gallus_lncRNA</dt>
<dd>Ensembl IDs for chicken lncRNA genes</dd>


</dl>

lncRNA_gene_list: lncRNA gene list

Description

Usage

Arguments

Format