dme_subset

<p>Drosophila gut scRNA-seq data, 10X Chromium
Subset to 45 cells per cell type as an example data</p>

datasets

Traditional methods for analyzing single cell RNA-seq datasets focus solely on gene expression, but this package introduces a novel approach that goes beyond this limitation. Using Gene Ontology terms as features, the package allows for the functional profile of cell populations, and comparison within and between datasets from the same or different species. Our approach enables the discovery of previously unrecognized functional similarities and differences between cell types and has demonstrated success in identifying cell types' functional correspondence even between evolutionarily distant species.

Yuyao Song

scGOclust

Measuring Cell Type Similarity with Gene Ontology in Single-Cell
RNA-Seq

Irene Papatheodorou

dme_subset function

Format

Drosophila gut scRNA-seq data, 10X Chromium
Subset to 45 cells per cell type as an example data — dme_subset

Drosophila gut scRNA-seq data, 10X Chromium
Subset to 45 cells per cell type as an example data

dme_subset: Drosophila gut scRNA-seq data, 10X Chromium Subset to 45 cells per cell type as an example data

Description

Usage

Arguments

Format