mmu_subset

<p>Mouse stomach and intestine scRNA-seq data, microwell-seq
Subset to 50 cells per cell type as an example data</p>

datasets

Traditional methods for analyzing single cell RNA-seq datasets focus solely on gene expression, but this package introduces a novel approach that goes beyond this limitation. Using Gene Ontology terms as features, the package allows for the functional profile of cell populations, and comparison within and between datasets from the same or different species. Our approach enables the discovery of previously unrecognized functional similarities and differences between cell types and has demonstrated success in identifying cell types' functional correspondence even between evolutionarily distant species.

Yuyao Song

scGOclust

Measuring Cell Type Similarity with Gene Ontology in Single-Cell
RNA-Seq

Irene Papatheodorou

mmu_subset function

Format

Mouse stomach and intestine scRNA-seq data, microwell-seq
Subset to 50 cells per cell type as an example data — mmu_subset

Mouse stomach and intestine scRNA-seq data, microwell-seq
Subset to 50 cells per cell type as an example data

mmu_subset: Mouse stomach and intestine scRNA-seq data, microwell-seq Subset to 50 cells per cell type as an example data

Description

Usage

Arguments

Format