scMetaTraj_plot_module_cards

Provides a framework for modeling cellular metabolic states and continuous
metabolic trajectories from single-cell RNA-seq data using pathway-level
scoring. Enables lineage-restricted metabolic analysis, metabolic
'pseudotime' inference, module-level trend analysis, and visualization of
metabolic state transitions.

Jinwei Dai

scMetaTraj

Metabolic State Space and Trajectory Analysis for Single-Cell
Data

scMetaTraj_plot_module_cards function

<dl><dt>cluster_profile</dt>
<dd>Cluster-by-module matrix</dd>
<dt>module_axis_map</dt>
<dd>Data.frame with columns: module, axis</dd>
<dt>axis_palette</dt>
<dd>Named vector of colors for axes</dd></dl>

Arguments

Plot metabolic module cards — scMetaTraj_plot_module_cards

<dl>

<dt>cluster_profile</dt>
<dd>Cluster-by-module matrix</dd>


<dt>module_axis_map</dt>
<dd>Data.frame with columns: module, axis</dd>


<dt>axis_palette</dt>
<dd>Named vector of colors for axes</dd>

</dl>

scMetaTraj_plot_module_cards: Plot metabolic module cards

Description

Usage

Value

Arguments