scMetaTraj_plot_trend_by_cluster

Plot module trends by metabolic cluster
Plot module trends along mPT stratified by cluster

Provides a framework for modeling cellular metabolic states and continuous
metabolic trajectories from single-cell RNA-seq data using pathway-level
scoring. Enables lineage-restricted metabolic analysis, metabolic
'pseudotime' inference, module-level trend analysis, and visualization of
metabolic state transitions.

Jinwei Dai

scMetaTraj

Metabolic State Space and Trajectory Analysis for Single-Cell
Data

scMetaTraj_plot_trend_by_cluster function

<dl><dt>trend_by_cluster</dt>
<dd>Output from scMetaTraj_trend_by_cluster().</dd>
<dt>palette</dt>
<dd>Named vector of cluster colors (e.g., scMetaTraj_palette_discrete).</dd></dl>

Arguments

Plot module trends by metabolic cluster — scMetaTraj_plot_trend_by_cluster

<dl>

<dt>trend_by_cluster</dt>
<dd>Output from scMetaTraj_trend_by_cluster().</dd>


<dt>palette</dt>
<dd>Named vector of cluster colors (e.g., scMetaTraj_palette_discrete).</dd>

</dl>

scMetaTraj_plot_trend_by_cluster: Plot module trends by metabolic cluster

Description

Usage

Value

Arguments