scRNAstat (version 0.1.1)

basic_markers: Basic Markers

Description

Basic Markers

Usage

basic_markers(sce, org = "human", group = "orig.ident", dir = ".")

Arguments

sce

An object of class Seurat

org

human or mouse, default: human

group

default:`orig.ident`, you can change it to `seurat_clusters` or `celltype`

dir

the path for saving the figures by `DotPlot` with known famous markers.

Value

a list of figures by `DotPlot`

Examples

# NOT RUN {
basic_markers(AJ064_small_last_sce,dir=tempdir())
# }