# NOT RUN {
### many of the functions in this package are interconnected so the
### easiest way to learn to use the package is by working through the vignette,
### which is available at ajpete.com/software
#assumes you have run the example for the "scalpel" function
#update the smallest threshold used for image segmentation in Step 1
scalpelOutput = updateThreshold(step0Output = scalpelOutput)
# }
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