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scape (version 2.3.3)
Statistical Catch-at-Age Plotting Environment
Description
Import, plot, and diagnose results from statistical catch-at-age models, used in fisheries stock assessment.
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Version
2.3.3
2.3-2
2.3-1
2.2-0
2.1-0
2.0-2
2.0-1
2.0-0
1.1-5
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1.0-2
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Install
install.packages('scape')
Monthly Downloads
343
Version
2.3.3
License
GPL-3
Maintainer
Arni Magnusson
Last Published
November 23rd, 2020
Functions in scape (2.3.3)
Search functions
getN
Extract Sample Size
estSigmaR
Estimate Recruitment Sigma
importMCMC
Import Coleraine MCMC Results
importProj
Import Coleraine MCMC Projections
estSigmaI
Estimate Abundance Index Sigma
estN
Estimate Effective Sample Size
scape-package
Statistical Catch-at-Age Plotting Environment
plotN
Plot Numbers at Age
x.cod
Cod Assessment
plotSel
Plot Selectivity and Maturity
x.sbw
Whiting Assessment
x.saithe
Saithe Assessment
iterate
Get Candidate Sigmas and Sample Sizes
importCol
Import Coleraine Model Results
importADCAM
Import ADCAM Model Results
plotIndex
Plot Abundance Index
x.oreo
Oreo Assessment
plotLA
Plot Length at Age
x.ling
Ling Assessment
plotB
Plot Biomass, Recruitment, and Landings
xproj
MCMC Projections from Cod Assessment
xmcmc
MCMC Results from Cod Assessment
getSigmaI
Extract Abundance Index Sigma
plotCA
Plot Catch at Age
getSigmaR
Extract Recruitment sigma
plotCL
Plot Catch at Length