scape (version 1.0-4)

plotSel: Plot Selectivity and Maturity

Description

Plot scape model predicted selectivity and observed maturity.

Usage

plotSel(model, together=FALSE, series=NULL, sex=NULL, axes=TRUE,
        legend="bottom", main="", xlab="", ylab="", cex.main=1.2,
        cex.legend=1, cex.lab=1, cex.strip=0.8, cex.axis=0.8, las=1,
        tck=0, tick.number=5, lty.grid=3, col.grid="grey", pch="m",
        cex.points=1, col.points="black", lty.lines=1, lwd.lines=4,
        col.lines=c("red","blue"), plot.it=TRUE, ...)

Arguments

model

fitted scape model.

together

whether gears should be plotted in one panel.

series

vector of strings indicating which gears or surveys should be plotted (all by default).

sex

string indicating which sex should be plotted (both by default).

axes

whether axis values should be plotted.

legend

legend location: "bottom", "left", "top", "right", or "" to suppress legend.

main

main title.

xlab

x-axis label.

ylab

y-axis label.

cex.main

size of main title.

cex.legend

size of legend text.

cex.lab

size of axis labels.

cex.strip

size of strip labels.

cex.axis

size of tick labels.

las

orientation of tick labels: 0=parallel, 1=horizontal, 2=perpendicular, 3=vertical.

tck

tick mark length.

tick.number

number of tick marks.

lty.grid

line type of gridlines.

col.grid

colour of gridlines.

pch

symbol for points.

cex.points

size of points.

col.points

colour of points.

lty.lines

line type of main lines, possibly a vector.

lwd.lines

line width of main lines, possibly a vector.

col.lines

colour of main lines, possibly a vector.

plot.it

whether to draw plot.

...

passed to xyplot.

Value

• When plot.it=TRUE, a trellis plot is drawn and a data frame is returned, containing the data used for plotting. When plot.it=FALSE, a trellis object is returned.

concept

Fisheries stock assessment

See Also

Fitted Coleraine models can be imported using importRes. Trellis plot details can be studied from the Lattice help page.

Examples

plotSel(x.ling, xlab="Age", ylab="Selectivity and maturity")

plotSel(x.cod, together=TRUE, xlab="Age
", ylab="Selectivity",
        pch=NA, col.lines=c("seagreen","salmon"), strip=FALSE)