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scape (version 2.3-1)

Statistical Catch-at-Age Plotting Environment

Description

Import, plot, and diagnose results from statistical catch-at-age models, used in fisheries stock assessment.

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Version

Install

install.packages('scape')

Monthly Downloads

266

Version

2.3-1

License

GPL (>= 2)

Maintainer

Arni Magnusson

Last Published

June 20th, 2017

Functions in scape (2.3-1)

estSigmaR

Estimate Recruitment Sigma
getN

Extract Sample Size
getSigmaI

Extract Abundance Index Sigma
getSigmaR

Extract Recruitment sigma
importMCMC

Import Coleraine MCMC Results
importProj

Import Coleraine MCMC Projections
estN

Estimate Effective Sample Size
estSigmaI

Estimate Abundance Index Sigma
importADCAM

Import ADCAM Model Results
importCol

Import Coleraine Model Results
scape-package

Statistical Catch-at-Age Plotting Environment
x.cod

Cod Assessment
plotN

Plot Numbers at Age
plotSel

Plot Selectivity and Maturity
x.saithe

Saithe Assessment
x.sbw

Whiting Assessment
plotIndex

Plot Abundance Index
plotLA

Plot Length at Age
x.ling

Ling Assessment
x.oreo

Oreo Assessment
iterate

Get Candidate Sigmas and Sample Sizes
plotB

Plot Biomass, Recruitment, and Landings
xmcmc

MCMC Results from Cod Assessment
xproj

MCMC Projections from Cod Assessment
plotCA

Plot Catch at Age
plotCL

Plot Catch at Length