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scape (version 2.3-2)
Statistical Catch-at-Age Plotting Environment
Description
Import, plot, and diagnose results from statistical catch-at-age models, used in fisheries stock assessment.
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Version
Version
2.3.5
2.3.3
2.3-2
2.3-1
2.2-0
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2.0-2
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2.0-0
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1.0-3
1.0-2
Install
install.packages('scape')
Monthly Downloads
237
Version
2.3-2
License
GPL (>= 2)
Maintainer
Arni Magnusson
Last Published
May 1st, 2018
Functions in scape (2.3-2)
Search all functions
getSigmaI
Extract Abundance Index Sigma
x.cod
Cod Assessment
xmcmc
MCMC Results from Cod Assessment
getN
Extract Sample Size
estSigmaI
Estimate Abundance Index Sigma
xproj
MCMC Projections from Cod Assessment
importProj
Import Coleraine MCMC Projections
plotN
Plot Numbers at Age
plotIndex
Plot Abundance Index
plotCL
Plot Catch at Length
plotCA
Plot Catch at Age
x.ling
Ling Assessment
plotSel
Plot Selectivity and Maturity
x.oreo
Oreo Assessment
plotLA
Plot Length at Age
importADCAM
Import ADCAM Model Results
iterate
Get Candidate Sigmas and Sample Sizes
importCol
Import Coleraine Model Results
x.saithe
Saithe Assessment
x.sbw
Whiting Assessment
plotB
Plot Biomass, Recruitment, and Landings
estN
Estimate Effective Sample Size
importMCMC
Import Coleraine MCMC Results
estSigmaR
Estimate Recruitment Sigma
getSigmaR
Extract Recruitment sigma
scape-package
Statistical Catch-at-Age Plotting Environment