correct_gene_symbols

This Function is used to return the cell markers names processed for the sctype approach

Performing cell type annotation based on cell markers from a unified database. The approach utilizes correlation-based approach combined with association analysis using Fisher-exact and phyper statistical tests (Upton, Graham JG. (1992) <DOI:10.2307/2982890>).

Mohamed Soudy

sccca

Single-Cell Correlation Based Cell Type Annotation

Sophie LE BARS

Enrico Glaab

correct_gene_symbols function

<dl><dt>markers</dt>
<dd>list of unique cell markers.</dd></dl>

Arguments

Mohmed Soudy <a href="/link/Mohamed.soudy%40uni.lu?package=sccca&version=0.1.1" data-mini-rdoc="sccca::Mohamed.soudy@uni.lu">Mohamed.soudy@uni.lu</a> and Sohpie LE BARS <a href="/link/sophie.lebars%40uni.lu?package=sccca&version=0.1.1" data-mini-rdoc="sccca::sophie.lebars@uni.lu">sophie.lebars@uni.lu</a> and Enrico Glaab <a href="/link/enrico.glaab%40uni.lu?package=sccca&version=0.1.1" data-mini-rdoc="sccca::enrico.glaab@uni.lu">enrico.glaab@uni.lu</a>

Author

Process the cell markers names — correct_gene_symbols

<dl>

<dt>markers</dt>
<dd>list of unique cell markers.</dd>

</dl>

Mohmed Soudy <a href='mailto:Mohamed.soudy@uni.lu'>Mohamed.soudy@uni.lu</a> and Sohpie LE BARS <a href='mailto:sophie.lebars@uni.lu'>sophie.lebars@uni.lu</a> and Enrico Glaab <a href='mailto:enrico.glaab@uni.lu'>enrico.glaab@uni.lu</a>

correct_gene_symbols: Process the cell markers names

Description

Usage

Value

Arguments

Author