set_knitr_opts

Call this function in the setup chunk of your R Markdown files.

A collection of useful functions and example code created and
used by the Schloss Lab for reproducible microbiome research. Perform
common tasks like read files created by mothur <https://mothur.org/>,
tidy up your microbiome data, and format R Markdown documents for
publication. See the website <http://www.schlosslab.org/schtools/>
for more information, documentation, and examples.

Kelly Sovacool

schtools

Schloss Lab Tools for Reproducible Microbiome Research

set_knitr_opts function

Pat Schloss <a href="/link/pschloss%40umich.edu?package=schtools&version=0.4.1" data-mini-rdoc="schtools::pschloss@umich.edu">pschloss@umich.edu</a>
Kelly Sovacool <a href="/link/sovacool%40umich.edu?package=schtools&version=0.4.1" data-mini-rdoc="schtools::sovacool@umich.edu">sovacool@umich.edu</a>

Author

Set knitr chunk options &amp; inline hook — set_knitr_opts

Pat Schloss <a href='mailto:pschloss@umich.edu'>pschloss@umich.edu</a>
Kelly Sovacool <a href='mailto:sovacool@umich.edu'>sovacool@umich.edu</a>

set_knitr_opts: Set knitr chunk options & inline hook

Description

Usage

Arguments

Author