cluster_overlap

Compares two clusterings and creates a table of overlap between them.
Module labels do not have to match.

Implementation of the scregclust algorithm
described in Larsson, Held, et al. (2024) <doi:10.1038/s41467-024-53954-3>
which reconstructs regulatory programs of target genes in scRNA-seq data.
Target genes are clustered into modules and each module is associated with a linear
model describing the regulatory program.

Felix Held

scregclust

Reconstructing the Regulatory Programs of Target Genes in
scRNA-Seq Data

Ida Larsson

Sven Nelander

André Armatowski

cluster_overlap function

<dl><dt>k1</dt>
<dd>First clustering</dd>
<dt>k2</dt>
<dd>Second clustering</dd></dl>

Arguments

Create a table of module overlap for two clusterings — cluster_overlap

<dl>

<dt>k1</dt>
<dd>First clustering</dd>


<dt>k2</dt>
<dd>Second clustering</dd>

</dl>

cluster_overlap: Create a table of module overlap for two clusterings

Description

Usage

Value

Arguments