get_regulator_list

Implementation of the scregclust algorithm
described in Larsson, Held, et al. (2024) <doi:10.1038/s41467-024-53954-3>
which reconstructs regulatory programs of target genes in scRNA-seq data.
Target genes are clustered into modules and each module is associated with a linear
model describing the regulatory program.

Felix Held

scregclust

Reconstructing the Regulatory Programs of Target Genes in
scRNA-Seq Data

Ida Larsson

Sven Nelander

André Armatowski

get_regulator_list function

<dl><dt>mode</dt>
<dd>Determines which genes are considered to be regulators.
Currently supports TF=transcription factors and kinases.</dd></dl>

Arguments

Return list of regulator genes — get_regulator_list

<dl>

<dt>mode</dt>
<dd>Determines which genes are considered to be regulators.
Currently supports TF=transcription factors and kinases.</dd>

</dl>

get_regulator_list: Return list of regulator genes

Description

Usage

Value

Arguments

See Also