Package data before clustering
scregclust_format(expression_matrix, mode = c("TF", "kinase"))
A list with
The gene symbols extracted from the expression matrix
A vector filled with 1
's of the same length as
there are columns in the gene expression matrix.
Whether a gene is considered to be a regulator or not,
determined dependent on mode
.
The p x n gene expression matrix with gene symbols as rownames.
Determines which genes are considered to be regulators.
get_regulator_list()