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sdm (version 1.2-46)

Species Distribution Modelling

Description

An extensible framework for developing species distribution models using individual and community-based approaches, generate ensembles of models, evaluate the models, and predict species potential distributions in space and time. For more information, please check the following paper: Naimi, B., Araujo, M.B. (2016) .

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Version

Install

install.packages('sdm')

Monthly Downloads

1,206

Version

1.2-46

License

GPL (>= 3)

Maintainer

Babak Naimi

Last Published

July 17th, 2024

Functions in sdm (1.2-46)

Graphical User Interface

nicheSimilarity

Niche Similarity

Converting probability of occurrence to Presence-absence

get models' outputs

Get information/modelIDs relevant to fitted models in a sdmModels object

read/write sdm* object from/to a file

Generate and plot response curves

variable importance

Principle Component Analysis

Subset models in a sdmModels object

sdm model prediction

An S4 class representing sdm dataset

Extract by index

Indexing to extract records of a sdmdata object

install all packages that may be required by the package

Get a data.frame with record id values (rID)

Combine (merge) two sdmModels into a single object

sdmCorrelativeMethod-class

sdmCorrelativeMethod class

Names of species

sdmModels-classes

sdmModels classes

creating sdm Data object

Generate and plot Ecological Niche

creating sdmSetting object

plot ROC curves

Fit and evaluate species distribution models

Generate background (pseudo-absence) records

Adapting sdm* objects in the new version

add a new method to the package

get or set spatial coordinates of species data

featuresFrame-class

featureFrame class

evaluate for accuracy

Ensemble Forecasting of SDMs