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sdnet (version 2.4.1)

Soft-Discretization-Based Bayesian Network Inference

Description

Fitting discrete Bayesian networks using soft-discretized data. Soft-discretization is based on mixture of normal distributions. Also implemented is a supervised Bayesian network learning employing Kullback-Leibler divergence. For more information see Balov (2013) .

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Version

Install

install.packages('sdnet')

Monthly Downloads

11

Version

2.4.1

License

GPL (>= 2)

Maintainer

Nikolay Balov

Last Published

April 30th, 2019

Functions in sdnet (2.4.1)

cnLoglik-method

Sample Log-likelihood
cnMatEdges-method

Network Edge Matrix
cnNodeSampleLoglik

Node Log-likelihood
catNetworkDistance-class

Class "catNetworkDistance"
cnNodes-method

Netwok Nodes
cnSearchOrder

Network Search for Given Node Order
cnCatnetFromEdges

catNetwork from Edges
cnSetProb-method

Set Probability from Data
cnCatnetFromSif

Categorical Network from Simple Interaction File (SIF) and Bayesian Networks Interchange Format (BIF)
cnFindAIC-method

Find Network by AIC
cnFindBIC-method

Find Network by BIC
catNetworkEvaluate-class

Classes "catNetworkEvaluate" and "dagEvaluate"
cnNumNodes-method

Network Size
cnDot-method

Network Description File
cnOrder-method

Network Node Order
cnSamples-method

Samples from Network
cnEdges-method

Network Edges
cnParHist-method

Parenthood Histogram
cnSearchHist

Parent Histogram Matrix
isDAG

Check Direct Acyclic Graph (DAG) Condition
cnDiscretize

Data Categorization
dag2cpdag-method

Complete Network Representation
cnComplexity-method

Network Complexity
cnNodeLoglik

Node Log-likelihood
cnNodeMarginalProb-method

Probability Calculations
cnEntropy

Pairwise Node Entropy
cnSetSeed

Random Generator Seed
cnParents-method

Network Parent Structure
cnPredict-method

Prediction
expres

Naive Classifier of Gene Expression Profiles
cnFind-method

Find Network by Complexity
cnSubNetwork-method

Sub-Network
tyroid

Tyroid cancer data
cnProb-method

Conditional Probability Structure
CPDAG-class

Class CPDAG
catNetwork-class

Class "catNetwork"
sdnet-package

sdnet: Soft Discretization-based Bayesian Network Inference
cnMatParents-method

Network Parent Matrix
cnNew

New catNetwork
cnPearsonTest-method

Goodness of Fit Test
cnPlot-method

Plot Network
cnRandomCatnet

Random Network
cnReorderNodes-method

Reorder Network Nodes
cnCluster-method

Network Clustering
cnCompare-method

Network Comparison