sdtmchecks (version 1.0.0)

check_ae_aestdtc_after_dd: Check for AE dates occurring after death date

Description

This check looks for AE dates that occur after death date

Usage

check_ae_aestdtc_after_dd(AE, DS, preproc = identity, ...)

Value

Boolean value for whether the check passed or failed, with 'msg' attribute if the check failed

Arguments

AE

Adverse Event SDTM dataset with variables USUBJID, AEDTHDTC, AESTDTC, AEDECOD, AETERM, AESPID (optional)

DS

Disposition SDTM dataset with variables USUBJID, DSSTDTC, DSDECOD, DSTERM, DSSPID (optional)

preproc

An optional company specific preprocessing script

...

Other arguments passed to methods

Author

Nina Ting Qi

Examples

AE <- data.frame(STUDYID = 1:5, USUBJID = LETTERS[1:5],
                 AEDTHDTC = c(rep("", 4), "2016-01-01"),
                 AESTDTC = rep("2016-01-01", 5),
                 AEDECOD = c("","", rep("Myocarditis",3)),
                 AETERM = c("INJURY", rep("MYOCARDITIS", 4)),
                 AESPID = "FORMNAME-R:19/L:19XXXX",
                 stringsAsFactors = FALSE)

DS <- data.frame(STUDYID = 1:5, USUBJID = LETTERS[1:5],
                 DSSTDTC = rep("2016-01-02", 5),
                 DSDECOD = c(LETTERS[1:4], "death"),
                 DSSPID = "XXX-R:0",
                 DSTERM = letters[1:5],
                 stringsAsFactors = FALSE)

check_ae_aestdtc_after_dd(AE,DS)

AE$AESTDTC[1] <- "2016-01-03"
AE$USUBJID[1] <- AE$USUBJID[5]

check_ae_aestdtc_after_dd(AE, DS,preproc=roche_derive_rave_row)

AE$AESPID <- NULL
check_ae_aestdtc_after_dd(AE, DS)

DS$DSSPID <- NULL
check_ae_aestdtc_after_dd(AE, DS)

AE$AESTDTC <- NULL
check_ae_aestdtc_after_dd(AE, DS)