sdtmchecks (version 1.0.0)

check_dd_ae_aedthdtc_ds_dsstdtc: Check if death date is the same in AE and DS domains

Description

This check compares death date in AE AEDTHDT with death date in DS DSSTDTC. It is expected that they are the same.

Usage

check_dd_ae_aedthdtc_ds_dsstdtc(AE, DS, preproc = identity, ...)

Value

boolean value if check failed or passed with 'msg' attribute if the test failed

Arguments

AE

Adverse Events SDTM dataset with variables USUBJID and AEDTHDTC

DS

Disposition SDTM dataset with variables USUBJID, DSDECOD, DSSTDTC

preproc

An optional company specific preprocessing script

...

Other arguments passed to methods

Author

Hiral Raval

Examples

AE <- data.frame(
 STUDYID = rep(1, 3),
 USUBJID = 1:3,
 AEDTHDTC = c("2020-01-01","2020-01-02","2020-01-03"),
 AESPID = "FORMNAME-R:19/L:19XXXX"
)

DS <- data.frame(
 STUDYID = rep(1, 3),
 USUBJID = 1:3,
 DSDECOD = rep("DEATH", 3),
 DSSTDTC = c("2020-01-01","2020-01-02","2020-01-03"),
 DSSPID = "XXX-R:0",
 stringsAsFactors = FALSE
)

# no case
check_dd_ae_aedthdtc_ds_dsstdtc(AE, DS)

# 1 case
DS[3, "DSSTDTC"] <- "2000-01-01"
check_dd_ae_aedthdtc_ds_dsstdtc(AE, DS, preproc=roche_derive_rave_row)

# check for non existence of vars
DS$DSDECOD <- NULL
DS$DSSTDTC <- NULL
check_dd_ae_aedthdtc_ds_dsstdtc(AE, DS)