sdtmchecks (version 1.0.0)

check_tr_dup: Check for duplicate TR records

Description

This check looks for duplicate TR records and returns a data frame. Only applies to assessments by Investigator, selected based on uppercased TREVAL = "INVESTIGATOR" or missing or TREVAL variable does not exist.

Usage

check_tr_dup(TR)

Value

boolean value if check failed or passed with 'msg' attribute if the test failed

Arguments

TR

dataframe with variables USUBJID, TRCAT, TRLINKID/TRLNKID, TRTESTCD, TRSTRESC, TRDTC, TRSPID (if it exists)

Author

Joel Laxamana

Examples

# example with an error
TR <- data.frame(
 USUBJID  = c(1,1,2,2),
 TRCAT    = c(1,1,2,2),
 TRTESTCD = c(1,1,2,2),
 TRLINKID = c(1,1,2,2),
 TRDTC = c(rep("2016-01-01",2), rep("2016-06-01",2)),
 TRSTRESC = c(1,1,2,2),
 TRSPID = "FORMNAME-R:19/L:19XXXX",
 TREVAL = "INVESTIGATOR",
 stringsAsFactors = FALSE
)

check_tr_dup(TR)

TR1 <- TR
TR1$TRSPID <- NULL

check_tr_dup(TR1)

TR2 <- TR
TR2$TREVAL <- NULL

check_tr_dup(TR2)

# example with no records flagged because issues only among IRF records
TR3 <- TR
TR3$TREVAL <- "INDEPENDENT ASSESSOR"
check_tr_dup(TR3)

# example with required variable missing
TR4 <- TR
TR4$TRLINKID <- NULL
check_tr_dup(TR4)