sortingtraits

Data checking and trait sorting
In preparation for likelihood calculation, it orders trait data according
the tree tips

Simultaneously infers state-dependent diversification across
two or more states of a single or multiple traits while accounting for the
role of a possible concealed trait. See Herrera-Alsina et al. (2019)
<doi:10.1093/sysbio/syy057>.

Rampal Etienne

secsse

Several Examined and Concealed States-Dependent Speciation and
Extinction

Leonel Herrera Alsina

Paul van Els

Thijs Janzen

Hanno Hildenbrandt

Pedro Santos Neves

Rampal S. Etienne

sortingtraits function

<dl><dt>trait_info</dt>
<dd>data frame where first column has species ids and the second
one is the trait associated information.</dd>
<dt>phy</dt>
<dd>phylogenetic tree of class <code>phylo</code>, rooted and with
branch lengths.</dd></dl>

Arguments

Data checking and trait sorting
In preparation for likelihood calculation, it orders trait data according
the tree tips — sortingtraits

<dl>

<dt>trait_info</dt>
<dd>data frame where first column has species ids and the second
one is the trait associated information.</dd>


<dt>phy</dt>
<dd>phylogenetic tree of class <code>phylo</code>, rooted and with
branch lengths.</dd>

</dl>

sortingtraits: Data checking and trait sorting In preparation for likelihood calculation, it orders trait data according the tree tips

Description

Usage

Value

Arguments

Examples