gvec_to_gcount

Inverse function of <code>gcount_to_gvec()</code>.

Provides tests for segregation distortion in F1
polyploid populations under different assumptions of meiosis.
These tests can account for double reduction, partial preferential pairing,
and genotype uncertainty through the use of genotype likelihoods.
Parallelization support is provided. Details of these methods are
described in Gerard et al. (2025a) <doi:10.1007/s00122-025-04816-z>
and Gerard et al. (2025b) <doi:10.1101/2025.06.23.661114>.
Part of this material is based upon work supported by the
National Science Foundation under Grant No. 2132247. The
opinions, findings, and conclusions or recommendations expressed
are those of the author and do not necessarily reflect the views
of the National Science Foundation.

David Gerard

segtest

Tests for Segregation Distortion in Polyploids

Mira Thakkar

Guilherme da Silva Pereira

NSF DBI 2132247 

gvec_to_gcount function

<dl><dt>gvec</dt>
<dd>The vector of genotypes. <code>gvec[i]</code> is the genotype
for individual i.</dd>
<dt>ploidy</dt>
<dd>The ploidy of the species.</dd></dl>

Arguments

Author

Inverse function of gcount_to_gvec(). — gvec_to_gcount

<dl>

<dt>gvec</dt>
<dd>The vector of genotypes. <code>gvec[i]</code> is the genotype
for individual i.</dd>


<dt>ploidy</dt>
<dd>The ploidy of the species.</dd>

</dl>

gvec_to_gcount: Inverse function of `gcount_to_gvec()`.

Description

Usage

Value

Arguments

Author

See Also

Examples