n_pp_mix

The number of disomic inheritance patterns for a given ploidy and a given
parental dosage. See also <code>seg</code> for the list of all possible
disomic inheritance patterns for even ploidies up to 20.

Provides tests for segregation distortion in F1
polyploid populations under different assumptions of meiosis.
These tests can account for double reduction, partial preferential pairing,
and genotype uncertainty through the use of genotype likelihoods.
Parallelization support is provided. Details of these methods are
described in Gerard et al. (2025a) <doi:10.1007/s00122-025-04816-z>
and Gerard et al. (2025b) <doi:10.1101/2025.06.23.661114>.
Part of this material is based upon work supported by the
National Science Foundation under Grant No. 2132247. The
opinions, findings, and conclusions or recommendations expressed
are those of the author and do not necessarily reflect the views
of the National Science Foundation.

David Gerard

segtest

Tests for Segregation Distortion in Polyploids

Mira Thakkar

Guilherme da Silva Pereira

NSF DBI 2132247 

n_pp_mix function

<dl><dt>g</dt>
<dd>parent genotype</dd>
<dt>ploidy</dt>
<dd>parent ploidy</dd></dl>

Arguments

Number of mixture components — n_pp_mix

<dl>

<dt>g</dt>
<dd>parent genotype</dd>


<dt>ploidy</dt>
<dd>parent ploidy</dd>

</dl>

n_pp_mix: Number of mixture components

Description

Usage

Value

Arguments

Examples