Function to plot a distribution of frequencies of codons given a 3d array of equilibrium frequency matrices
PlotEquilbriumCodonDistribution(eq.freq.matrices, values,
palette = "Set1", lwd = 2, ...)
A 3d array of eq.freq.matrix returned from ComputeEquilibriumFrequencies
The vector of labels for each matrix (i.e., different Phi values)
Color palette to use from RColorBrewer
Line width
Other paramters to pass to plot()