These are three-marker genotypes of one million F4 lines
from a cross between parent A and B, simulated using Rpackage
<pkg>hypred</pkg>.

datasets

A probability tree allows to compute probabilities of
	     complex events, such as genotype probabilities in intermediate generations of inbreeding
	     through recurrent self-fertilization (selfing). This package implements functionality to compute
	     probability trees for two- and three-marker genotypes in the F2 to F7 selfing
	     generations. The conditional probabilities are derived automatically
	     and in symbolic form. The package also provides functionality to
	     extract and evaluate the relevant probabilities.

Frank Technow

selfingTree

Genotype Probabilities in Intermediate Generations of Inbreeding
        Through Selfing

F4 function

A character matrix with one million rows and three columns.
Homozygousity for parents A or B is coded as "A" and "B",
respectively. Heterozygousity as "H".

F4: Genotypes of one million simulated F4 lines.

Description

Usage

Arguments

format

References