evalProb

Character vector with symbolic marginal node
  probabilities, i.e., a (subset of) an element of the list returned by
  function <code>nodeProbabilities</code>.

node.prob

Recombination frequencies. For three-marker genotypes,
  <code>x</code> is the recombination frequency between markers 1 and 2 and
  <code>y</code> that between markers 2 and 3. For two-marker genotypes,
  <code>z</code> is recombination frequency between

x,y,z

<code>node.prob</code> is split into several parts of size
  equal to <code>chunk.size</code> and summation done within each chunk first
  and then across chunks.

chunk.size

This function symbolically sums the marginal probabilities
of relevant nodes and evaluates them with user specified values for the
recombination frequencies.

A probability tree allows to compute probabilities of
	     complex events, such as genotype probabilities in intermediate generations of inbreeding
	     through recurrent self-fertilization (selfing). This package implements functionality to compute
	     probability trees for two- and three-marker genotypes in the F2 to F7 selfing
	     generations. The conditional probabilities are derived automatically
	     and in symbolic form. The package also provides functionality to
	     extract and evaluate the relevant probabilities.

evalProb: Evaluates the genotype probability

Description

Usage

Arguments

Value

Examples