genSubtree.2M

genSubtree.3M

Three (three-marker genotypes) or two (two-marker
  genotypes) character string with the configuration of gamete one and two of
  the parental genotype.

gam1,gam2

These functions generate sub-trees consisting of all
  genotypes (and their conditional probabilities) that can result after
  selfing the parental genotype.

genSubtree

A probability tree allows to compute probabilities of
	     complex events, such as genotype probabilities in intermediate generations of inbreeding
	     through recurrent self-fertilization (selfing). This package implements functionality to compute
	     probability trees for two- and three-marker genotypes in the F2 to F7 selfing
	     generations. The conditional probabilities are derived automatically
	     and in symbolic form. The package also provides functionality to
	     extract and evaluate the relevant probabilities.

genSubtree: Generates a sub-tree

Description

Usage

Arguments

Value

Examples