seq2R (version 2.0.1)

print.change.points: Short find.points summary

Description

find.points summary.

Usage

# S3 method for change.points
print(x=model,...)

Value

The function computes and returns a list of short information for a fitted change.points object.

Number of A-T base pairs

The returned value is the total nucleotide (adenine and thymine) contained in the sequence analyzed.

Number of C-G base pairs

In this case, the returned value is the sum of cytosine and guanine contained at the sequence.

Number of binning nodes

The number of binning nodes over which the function is to be estimated.

Number of bootstrap repeats

Number of bootstrap repeats.

Bandwidth

Value of the Kernel bandwidth or smoothing parameter used in the fiiting for A vs. T and C vs. G.

Exists any critical point

Emphasize if there is or not any critical.

Arguments

x

change.points object.

...

Other options.

Author

Nora M. Villanueva and Marta Sestelo.

Examples

library(seq2R)
#mtDNAhum <- read.genbank("NC_012920")
data(mtDNAhum)
DNA <- transform(mtDNAhum)
seq1 <- find.points(DNA)
seq1