summary.ThinData

A ThinData S3 object. This is generally output by either
<code><a rd-options="" href="/link/thin_diff?package=seqgendiff&version=1.2.2" data-mini-rdoc="seqgendiff::thin_diff">thin_diff</a></code>, <code><a rd-options="" href="/link/thin_2group?package=seqgendiff&version=1.2.2" data-mini-rdoc="seqgendiff::thin_2group">thin_2group</a></code>, or
<code><a rd-options="" href="/link/thin_lib?package=seqgendiff&version=1.2.2" data-mini-rdoc="seqgendiff::thin_lib">thin_lib</a></code>.

object

Provide summary output of a ThinData S3 object.

Generates/modifies RNA-seq data for use in simulations. We provide
a suite of functions that will add a known amount of signal to a real
RNA-seq dataset. The advantage of using this approach over simulating under
a theoretical distribution is that common/annoying aspects of the data
are more preserved, giving a more realistic evaluation of your method.
The main functions are select_counts(), thin_diff(), thin_lib(),
thin_gene(), thin_2group(), thin_all(), and effective_cor(). See
Gerard (2020) <doi:10.1186/s12859-020-3450-9> for details on the
implemented methods.

David Gerard

seqgendiff

RNA-Seq Generation/Modification for Simulation

summary.ThinData function

A ThinData S3 object. This is generally output by either
<code><a rd-options='' href='thin_diff'>thin_diff</a></code>, <code><a rd-options='' href='thin_2group'>thin_2group</a></code>, or
<code><a rd-options='' href='thin_lib'>thin_lib</a></code>.

summary.ThinData: Provide summary output of a ThinData S3 object.

Description

Usage

Arguments

Value