summary.ThinData

Provide summary output of a ThinData S3 object.

Generates/modifies RNA-seq data for use in simulations. We provide
a suite of functions that will add a known amount of signal to a real
RNA-seq dataset. The advantage of using this approach over simulating under
a theoretical distribution is that common/annoying aspects of the data
are more preserved, giving a more realistic evaluation of your method.
The main functions are select_counts(), thin_diff(), thin_lib(),
thin_gene(), thin_2group(), thin_all(), and effective_cor(). See
Gerard (2020) <doi:10.1186/s12859-020-3450-9> for details on the
implemented methods.

David Gerard

seqgendiff

RNA-Seq Generation/Modification for Simulation

summary.ThinData function

<dl><dt>object</dt>
<dd>A ThinData S3 object. This is generally output by either
<code>thin_diff</code>, <code>thin_2group</code>, or
<code>thin_lib</code>.</dd>
<dt>...</dt>
<dd>Not used.</dd></dl>

Arguments

Author

Provide summary output of a ThinData S3 object. — summary.ThinData

<dl>

<dt>object</dt>
<dd>A ThinData S3 object. This is generally output by either
<code>thin_diff</code>, <code>thin_2group</code>, or
<code>thin_lib</code>.</dd>


<dt>...</dt>
<dd>Not used.</dd>

</dl>

summary.ThinData: Provide summary output of a ThinData S3 object.

Description

Usage

Value

Arguments

Author