This data set gives the genetics code, the name of each codon, the IUPAC one-letter code for aminoacids and the physico-chemical class of amino acid and the pK values of amino acids described in Bjellqvist et al. (1993).
Arguments
Format
SEQINR.UTIL is a list containing the 4 following objects:
Source
Data prepared by D. Charif. The genetic codes have been taken from the ncbi database: https://www.ncbi.nlm.nih.gov/Taxonomy/Utils/wprintgc.cgi. Last visited on 2016-10-05 corresponding to last update of the Genetic Codes: April 30, 2013. The IUPAC one-letter code for aminoacids is descibed at: http://www.chem.qmul.ac.uk/iupac/AminoAcid/.
pK values of amino acids were taken from Bjellqvist et al.
Bjellqvist, B.,Hughes, G.J., Pasquali, Ch., Paquet, N., Ravier, F., Sanchez, J.-Ch., Frutiger, S. & Hochstrasser, D.F.(1993) The focusing positions of polypeptides in immobilized pH gradients can be predicted from their amino acid sequences. Electrophoresis, 14, 1023-1031.