ucoweight

Returns a list containing, for each of the 20 amino acids + STOP
 codon, the codon usage bias of each of the synonymous codon according
 to a given codon sequence.

 utilities

Exploratory data analysis and data visualization
for biological sequence (DNA and protein) data. Seqinr includes
utilities for sequence data management under the ACNUC system
described in Gouy, M. et al. (1984) Nucleic Acids Res.
12:121-127 <doi:10.1093/nar/12.1Part1.121>.

Simon Penel

seqinr

Biological Sequences Retrieval and Analysis

Delphine Charif

Olivier Clerc

Carolin Frank

Anamaria Necşulea

Leonor Palmeira

Guy Perrière

ucoweight function

<dl> <dt>sequence</dt>
<dd>A nucleic acids sequence</dd> <dt>numcode</dt>
<dd>The genetic code number as in <code>translate</code></dd></dl>

Arguments

Author

Weight of each synonymous codon — ucoweight

<dl>

 <dt>sequence</dt>
<dd>A nucleic acids sequence</dd>

 <dt>numcode</dt>
<dd>The genetic code number as in <code>translate</code></dd>

</dl>

Weight of each synonymous codon

ucoweight: Weight of each synonymous codon

Description

Usage

Value

Arguments

Author

References

See Also

Examples