seqminer (version 6.7)

tabix.createIndex.vcf: Create tabix index for bgzipped VCF file

Description

Create tabix index for bgzipped VCF file

Usage

tabix.createIndex.vcf(bgzipVcfFile)

Arguments

bgzipVcfFile

character, input vcf file

See Also

http://zhanxw.com/seqminer/ for online manual and examples

Examples

# NOT RUN {
fileName = system.file("vcf/all.anno.filtered.extract.vcf.gz", package = "seqminer")
tabix.createIndex.vcf(fileName)
# }