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sequence (version 2.0)

Analysis of Sequences of Events

Description

Pierre, J. S. and Kasper, C.,(1990), "The Design of Ethological Flow-Charts on Factorial Analysis Representations - an Application to the Study of the Male Mole-Cricket Sexual Courtship." Biology of Behaviour 15(3-4): 125-151.(in french). Includes the calculation of transition matrices, their manipulation (symmetrization and diagonal loading), their analysis by CA (Correspondence Analysis), their comparison by likelihood ratio tests, the graphic plot of flow charts on the factorial axes of the CA.

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Version

Install

install.packages('sequence')

Monthly Downloads

10

Version

2.0

License

GPL (>= 2)

Maintainer

Jean-Sebastien Pierre

Last Published

February 11th, 2020

Functions in sequence (2.0)

ca

Correspondence analysis
aphelinus

Flight behaviour of Aphelinus abdominalis
multMatrans

Converts a list of sequences into a list of transition matrices
mattrans

Creates of a succession matrix
flux

Draws a flow chart from a transition matrix
aphmat

Transition matrices of the flight behaviour of 10 individuals of Aphelinus abdominalis
wiepkema

Wiepkema's (1961) historical data
geneseq

Generation aof random sequences
xcsa

French CSA (1976) data
seriseq2

random series
seriseq

Random series
symet

Symmetrization and diagonal loading of a transition matrix
compseq

Comparison of behavioral (or any) sequences
smartArrow

Draws a 'smart' arrow between two points.
courtil

Sexual courtship of the male molecricket
rotation

Plane rotation
sequence-package

Analysis of behavioral (or of any other type) sequences.
homoth

Homothety
makeSeries

Builds a list of list from a vector and a factor
makedico

Build the dictionary of the sequences
matrcom

Calculates a common succession matrix
compmat

Comparison of transition (or succession) matrices
read.old.seq

Function to read the deprecated files *.SEQ
read.series.seq

Reads a series of sequences.