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seriation (version 1.0-1)

Infrastructure for seriation

Description

Infrastructure for seriation with an implementation of several seriation/sequencing techniques to reorder matrices, dissimilarity matrices, and dendrograms. Also contains some visualizations techniques based on seriation.

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Version

Install

install.packages('seriation')

Monthly Downloads

28,879

Version

1.0-1

License

GPL-2

Maintainer

Michael Hahsler

Last Published

August 25th, 2009

Functions in seriation (1.0-1)

permute

Permute a dist object, a matrix, an array, a list, or a numeric vector

Irish

Irish data

criterion_methods

Registry for criterion methods

seriate

Seriate objects in dissimilarity matrices, matrices or arrays

Psych24

Psych24 -- 24 psychological tests

get_order

Getting an integer permutation vector from a permutation object

seriation_methods

Registry for seriation methods

ser_permutation_vector

Class ser_permutation_vector -- A single permutation vector for seriation

pimage

Permutation image plot

Townships

Bertin's Characteristics and Townships Data Set

Munsingen

Hodson's Munsingen Data Set

Zoo

Zoo database

hmap

Plot heat map reordered by different algorithms

ser_permutation

Class ser_permutation -- A collection of permutation vectors for seriation

criterion

Criterion for a loss/merit function for data given a permutation