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seriation (version 1.0-12)

Infrastructure for seriation

Description

Infrastructure for seriation with an implementation of several seriation/sequencing techniques to reorder matrices, dissimilarity matrices, and dendrograms. Also contains some visualizations techniques based on seriation.

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Version

Install

install.packages('seriation')

Monthly Downloads

28,879

Version

1.0-12

License

GPL-2

Homepage

http://R-Forge.R-project.org/projects/seriation/

Maintainer

Michael Hahsler

Last Published

February 19th, 2014

Functions in seriation (1.0-12)

hmap

Plot heat map reordered by different algorithms

pimage

Permutation image plot

criterion

Criterion for a loss/merit function for data given a permutation

dissplot

Dissimilarity Plot

Psych24

Psych24 -- 24 psychological tests

ser_permutation

Class ser_permutation -- A collection of permutation vectors for seriation

get_order

Getting an integer permutation vector from a permutation object

Munsingen

Hodson's Munsingen Data Set

criterion_methods

Registry for criterion methods

seriation_methods

Registry for seriation methods

Zoo

Zoo database

permute

Permute a dist object, a matrix, an array, a list, or a numeric vector

Townships

Bertin's Characteristics and Townships Data Set

Seriate objects in dissimilarity matrices, matrices or arrays

ser_permutation_vector

Class ser_permutation_vector -- A single permutation vector for seriation