baseline

whenever y is below a cutoff (<code>blims[kab,2]</code>), substitute a random sample
from a baseline distribution

internal

Translates antibody levels measured in cross-sectional
population samples into estimates of the frequency with which
seroconversions (infections) occur in the sampled populations.
Replaces the previous `seroincidence` package.

Kristina Lai

serocalculator

Estimating Infection Rates from Serological Data

Chris Orwa

Kwan Ho Lee

Peter Teunis

Kristen Aiemjoy

Douglas Ezra Morrison

baseline function

<dl><dt>kab</dt>
<dd><a href="/link/integer?package=serocalculator&version=1.4.0" data-mini-rdoc="serocalculator::integer">integer</a> indicating which row to read from <code>blims</code></dd>
<dt>yvec</dt>
<dd>a <a href="/link/numeric?package=serocalculator&version=1.4.0" data-mini-rdoc="serocalculator::numeric">numeric</a> <a href="/link/vector?package=serocalculator&version=1.4.0" data-mini-rdoc="serocalculator::vector">vector</a> of predicted biomarker values,
for one biomarker</dd>
<dt>blims</dt>
<dd>range of possible baseline antibody levels</dd>
<dt>...</dt>
<dd>unused</dd></dl>

Arguments

Substitute baseline values — baseline

<dl>

<dt>kab</dt>
<dd><a href='https://rdrr.io/r/base/integer.html'>integer</a> indicating which row to read from <code>blims</code></dd>


<dt>yvec</dt>
<dd>a <a href='https://rdrr.io/r/base/numeric.html'>numeric</a> <a href='https://rdrr.io/r/base/vector.html'>vector</a> of predicted biomarker values,
for one biomarker</dd>


<dt>blims</dt>
<dd>range of possible baseline antibody levels</dd>


<dt>...</dt>
<dd>unused</dd>

</dl>

baseline: Substitute baseline values

Description

Usage

Value

Arguments