load_sr_params

Load longitudinal seroresponse parameter samples

Translates antibody levels measured in cross-sectional
population samples into estimates of the frequency with which
seroconversions (infections) occur in the sampled populations.
Replaces the previous `seroincidence` package.

Kristina Lai

serocalculator

Estimating Infection Rates from Serological Data

Chris Orwa

Kwan Ho Lee

Peter Teunis

Kristen Aiemjoy

Douglas Ezra Morrison

load_sr_params function

<dl><dt>file_path</dt>
<dd>path to an RDS file containing MCMC samples of antibody
seroresponse parameters <code>y0</code>, <code>y1</code>, <code>t1</code>, <code>alpha</code>, and <code>r</code>,
stored as a <code><a href="/link/data.frame()?package=serocalculator&version=1.4.0" data-mini-rdoc="serocalculator::data.frame()">data.frame()</a></code> or <a href="https://tibble.tidyverse.org/reference/tbl_df-class.html">tibble::tbl_df</a></dd>
<dt>antigen_isos</dt>
<dd><code><a href="/link/character()?package=serocalculator&version=1.4.0" data-mini-rdoc="serocalculator::character()">character()</a></code> vector of antigen isotypes used in analyses</dd></dl>

Arguments

Load longitudinal seroresponse parameter samples — load_sr_params

<dl>

<dt>file_path</dt>
<dd>path to an RDS file containing MCMC samples of antibody
seroresponse parameters <code>y0</code>, <code>y1</code>, <code>t1</code>, <code>alpha</code>, and <code>r</code>,
stored as a <code><a href='https://rdrr.io/r/base/data.frame.html'>data.frame()</a></code> or <a href='https://tibble.tidyverse.org/reference/tbl_df-class.html'>tibble::tbl_df</a></dd>


<dt>antigen_isos</dt>
<dd><code><a href='https://rdrr.io/r/base/character.html'>character()</a></code> vector of antigen isotypes used in analyses</dd>

</dl>

load_sr_params: Load longitudinal seroresponse parameter samples

Description

Usage

Value

Arguments

Examples