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shar (version 1.2.1)

Species-Habitat Associations

Description

Analyse species-habitat associations in R. Therefore, information about the location of the species is needed and about the environmental conditions. To test for significance habitat associations, one of the two components is randomized. Methods are mainly based on Plotkin et al. (2000) and Harms et al. (2001) .

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Version

Install

install.packages('shar')

Monthly Downloads

272

Version

1.2.1

License

GPL (>= 3)

Maintainer

Maximillian H.K. Hesselbarth

Last Published

May 4th, 2021

Functions in shar (1.2.1)

fit_point_process

fit_point_process
reconstruct_pattern_cluster

reconstruct_pattern_cluster
rcpp_sample

rcpp_sample
reconstruct_pattern_hetero

reconstruct_pattern_hetero
results_habitat_association

results_habitat_association
shar

shar
reconstruct_pattern_homo

reconstruct_pattern_homo
randomize_raster

randomize_raster
species_b

Species b
random_walk

Random walk
species_a

Species a
print.rd_pat

print.rd_pat
print.rd_ras

print.rd_ras
reconstruction

Reconstruction
reconstruct_pattern_marks

reconstruct_pattern_marks
plot_randomized_raster

plot_randomized_raster
torus_trans

Torus trans
print.rd_mar

print.rd_mar
translate_raster

translate_raster
landscape

Example landscape (random cluster neutral landscape model).
create_neighbourhood

create_neighbourhood
estimate_pcf_fast

estimate_pcf_fast
plot_energy

plot_energy
calculate_energy

calculate_energy
plot_randomized_pattern

plot_randomized_pattern
extract_points

extract_points
gamma_test

Gamma test
classify_habitats

classify_habitats