sharpr2 (version 1.1.1.0)

Estimating Regulatory Scores and Identifying ATAC-STARR Data

Description

An algorithm for identifying high-resolution driver elements for datasets from a high-definition reporter assay library. Xinchen Wang, Liang He, Sarah Goggin, Alham Saadat, Li Wang, Melina Claussnitzer, Manolis Kellis (2017) .

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Version

Install

install.packages('sharpr2')

Monthly Downloads

170

Version

1.1.1.0

License

GPL (>= 2)

Maintainer

Liang He

Last Published

May 16th, 2018

Functions in sharpr2 (1.1.1.0)

call_fdr

hidra_ex

An example dataset including a region of one chromosome from an ATAC-STARR library

sharpr2-package

Estimating regularoty scores and identifying high resolution driver elements for ATAC-STARR data